Videos

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ITCR supports a wide range of informatics tools to serve current and emerging needs across the cancer research continuum. Short introductory videos for many of the ITCR Tools are available below. Please see the Cancer Research Issue "Focus on Computer Resources" for more ITCR videos.

Title Category URL
IGV Data Standards https://www.youtube.com/watch?v=uez19GcqHF0
XNAT Imaging https://www.youtube.com/watch?v=ENk589mOkhI
Galaxy P multi-omics -omics http://bit.ly/2X2luxB
XNAT Imaging Informatics Platform Imaging https://www.youtube.com/watch?v=ENk589mOkhI
Electronic Medical Record Search Engine (EMERSE) Clinical https://vimeo.com/301918463
Methylation Integration (Mint) Clinical http://cancerres.aacrjournals.org/content/77/21/e27.figures-only
PETCT-CoSeg Imaging https://www.youtube.com/watch?v=sRlCCZpK3oQ
pathclust Network Biology https://www.youtube.com/watch?v=0qaovmMJPpY
WebMeV -omics https://www.youtube.com/watch?v=jCMLc-g4Qo0
UCSC Xena -omics https://www.youtube.com/watch?v=TSNc-EDjix4
Text Information Extraction System (TIES) Clinical https://www.youtube.com/watch?v=EzjAo9LJ4tg
ShEx Data Standards https://www.youtube.com/watch?v=fIElhAPQcwo
Pathology Imaging Informatics Platform (PIIP) Imaging https://www.youtube.com/watch?v=K34Gqt1ItYs
RADIOMICS.io Imaging https://www.youtube.com/watch?v=oN-qZx8VjQc
Quantitative Imaging In Pathology (QUIP) Imaging https://www.youtube.com/watch?v=uTKiI_VNwzs
P-Mart -omics https://www.youtube.com/watch?v=1-MEp-VWeP0
LesionTracker Web Image Viewer Imaging https://www.youtube.com/watch?v=gUIPtoSBL-Q
Next Generation Clustered Heat Maps -omics https://www.youtube.com/watch?v=v5G-HKlXI5U
Network Data Exchange (NDEx) Network Biology https://www.youtube.com/watch?v=ymn1HGPEwSA
ivyGlimpse Imaging, -omics https://www.youtube.com/watch?v=4qJaodLEI5o
GenePattern -omics https://www.youtube.com/watch?v=GHDnFecRm5g
3D Slicer Imaging https://www.youtube.com/watch?v=ikK5uDEmihU
cTAKES Clinical https://www.youtube.com/watch?v=TpGZIKEDYMw
Cancer-Related Analysis of Variants Toolkit (CRAVAT) -omics https://www.youtube.com/watch?v=CENpOaAwkco
Cistrome -omics https://www.youtube.com/watch?v=gQDYrtDhpVc
Single Cell Genome Viewer (SCGV) -omics https://www.youtube.com/watch?v=blvXRedv9xc
Bioconductor -omics https://www.youtube.com/watch?v=dg6NvmMVQ3I