Home | Informatics Technology for Cancer Research (ITCR)

Cancer Research Focus on
Computer Resources

Freely available special issue of the journal Cancer Research.
Focuses on computer resources funded by NCI including ITCR,
GDC, and NCI Cloud Resources.

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Network Data Exchange (NDEx)

NDEx is an online commons where scientists can upload, share, and
publicly distribute biological networks and pathway models. The NDEx
Project maintains a web-accessible public server and provides seamless
connectivity to Cytoscape.

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UCSC Xena

UCSC Xena securely analyzes and visualizes your private
functional genomics data set in the context of public and shared
genomic/phenotypic data sets such as TCGA, ICGC, TARGET, GTEx,
and GA4GH (TOIL).

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Text Information Extraction System

TIES is a service based software system for acquiring,
deidentifying, and processing clinical text reports using natural
language processing, and also for querying, sharing and using this
data to foster tissue and image based research, within and between
institutions.

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Introductory Videos

ITCR supports a wide range of informatics tools to serve current and emerging needs across the cancer research continuum.
Short introductory videos for many of the ITCR Tools are available below.