ITCR at the ISMB/ECCB Annual Meeting, July 21-25, 2019

The 27thConference on Intelligent Systems for Molecular Biology (ISMB) and the 18thEuropean Conference on Computational Biology (ECCB) Annual Meeting in Basel, Switzerland July 21-25, 2019.

Visit the National Cancer Institute (NCI), Informatics Technology for Cancer Research (ITCR) Program Exhibit Booth #8 to meet ITCR investigators and program staff to learn about the ITCR tools and funding opportunities! 

Download the Schedule





Date Time Topic Speaker
Sunday, July 21 7:30pm-8:30pm CNVnator: Detect somatic, subclonal, mosaic, amd germline CNVs from sequencing data. Alexej Abyzov, Mayo Clinic
Monday, July 22 9:30am-10:30am The Network Data Exchange, NDEx: Find, query, store, share, and publish networks. Use NDEx from the web, via Cystoscape, and in applications. Dexter Pratt, University of California San Diego
10:30am-11:30am CNVnator: Detect somatic, subclonal, mosaic, amd germline CNVs from sequencing data. Alexej Abyzov, Mayo Clinic
11:30am-12:30pm ITCR Program: Funding opportunities to support informatics needs across the cancer research continuum. Juli Klemm, National Cancer Institute
12:30pm-2:00pm Quantitative Imaging in Pathology, QuIP: Analyze and explore whole slide tissue images. Tahsin Kurc, Stony Brook University
2:00pm-3:00pm Trinity Cancer Transcriptome Analysis Toolkit: Assemble trascriptomes and identify mutations, fusions, and other trascript features. Brian Haas, Broad Institute
3:00pm-4:00pm AMARETTO: Discover cancer drivers and drugs using graph-based fusion of multi-omics, imaging, and perturbation data. Nathalie Pochet, BWH/HMS and Broad Institute
4:00pm-4:40pm OncoMX: Explore cancer biomarker data using the integrated OncoMX web portal. Hayley Dingerdissen, George Washington University
Tuesday, July 23 9:30am-10:30am Quantitative Imaging in Pathology, QuIP: Analyze and explore whole slide tissue images. Tahsin Kurc, Stony Brook University
10:30am-11:30am OncoMX: Explore cancer biomarker data using the integrated OncoMX web portal. Hayley Dingerdissen, George Washington University
11:30am-12:30pm ITCR Program: Funding opportunities to support informatics needs across the cancer research continuum. Juli Klemm, National Cancer Institute
12:30pm-2:00pm The Network Data Exchange, NDEx: Find, query, store, share, and publish networks. Use NDEx from the web, via Cystoscape, and in applications. Dexter Pratt, University of California San Diego
2:00pm-3:00pm AMARETTO: Discover cancer drivers and drugs using graph-based fusion of multi-omics, imaging, and perturbation data. Nathalie Pochet, BWH/HMS and Broad Institute
3:00pm-4:00pm ITCR Program: Funding opportunities to support informatics needs across the cancer research continuum. Juli Klemm, National Cancer Institute
4:00pm-4:40pm Trinity Cancer Transcriptome Analysis Toolkit: Assemble trascriptomes and identify mutations, fusions, and other trascript features. Brian Haas, Broad Institute
Wednesday, July 24 9:30am-10:30am AMARETTO: Discover cancer drivers and drugs using graph-based fusion of multi-omics, imaging, and perturbation data. Nathalie Pochet, BWH/HMS and Broad Institute
11:30am-12:30pm The Network Data Exchange, NDEx: Find, query, store, share, and publish networks. Use NDEx from the web, via Cystoscape, and in applications. Dexter Pratt, University of California San Diego
12:30pm-2:00pm Quantitative Imaging in Pathology, QuIP: Analyze and explore whole slide tissue images. Tahsin Kurc, Stony Brook University
2:00pm-3:00pm Trinity Cancer Transcriptome Analysis Toolkit: Assemble trascriptomes and identify mutations, fusions, and other trascript features. Brian Haas, Broad Institute
3:00pm-4:00pm OncoMX: Explore cancer biomarker data using the integrated OncoMX web portal. Hayley Dingerdissen, George Washington University
4:00pm-4:40pm CNVnator: Detect somatic, subclonal, mosaic, amd germline CNVs from sequencing data. Alexej Abyzov, Mayo Clinic
Thursday, July 25 9:30am-10:30am ITCR Program: Funding opportunities to support informatics needs across the cancer research continuum. Juli Klemm, National Cancer Institute
11:30am-12:30pm AMARETTO: Discover cancer drivers and drugs using graph-based fusion of multi-omics, imaging, and perturbation data. Nathalie Pochet, BWH/HMS and Broad Institute
12:30pm-2:00pm ITCR Program: Funding opportunities to support informatics needs across the cancer research continuum. Juli Klemm, National Cancer Institute

Publish Date:  Monday, July 15, 2019